Secure top most significant genome variants search: iDASH 2017 competition
One of the 3 tracks of iDASH Privacy & Security Workshop 2017 competition was to execute a whole genome variants search on private genomic data. Particularly, the search application was to find the top most significant SNPs (Single-Nucleotide Polymorphisms) in a database of genome records labeled with control or case. In this paper we discuss the solution submitted by our team to this competition.
S. Carpov and T. Tortech, "Secure top most significant genome variants search: iDASH 2017 competition", BMC Medical Genomics, vol. 11, no. 4, 2018, https://bmcmedgenomics.biomedcentral.com/articles/10.1186/s12920-018-0399-x